Polg-Related Disorders

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Summary

Clinical characteristics.

POLG-related disorders comprise a continuum of overlapping phenotypes that were clinically defined long before their molecular basis was known. Most affected individuals have some, but not all, of the features of a given phenotype; nonetheless, the following nomenclature can assist the clinician in diagnosis and management. Onset of the POLG-related disorders ranges from infancy to late adulthood.

  • Alpers-Huttenlocher syndrome (AHS), one of the most severe phenotypes, is characterized by childhood-onset progressive and ultimately severe encephalopathy with intractable epilepsy and hepatic failure.
  • Childhood myocerebrohepatopathy spectrum (MCHS) presents between the first few months of life and about age three years with developmental delay or dementia, lactic acidosis, and a myopathy with failure to thrive. Other findings can include liver failure, renal tubular acidosis, pancreatitis, cyclic vomiting, and hearing loss.
  • Myoclonic epilepsy myopathy sensory ataxia (MEMSA) now describes the spectrum of disorders with epilepsy, myopathy, and ataxia without ophthalmoplegia. MEMSA now includes the disorders previously described as spinocerebellar ataxia with epilepsy (SCAE).
  • The ataxia neuropathy spectrum (ANS) includes the phenotypes previously referred to as mitochondrial recessive ataxia syndrome (MIRAS) and sensory ataxia neuropathy dysarthria and ophthalmoplegia (SANDO). About 90% of persons in the ANS have ataxia and neuropathy as core features. Approximately two thirds develop seizures and almost one half develop ophthalmoplegia; clinical myopathy is rare.
  • Autosomal recessive progressive external ophthalmoplegia (arPEO) is characterized by progressive weakness of the extraocular eye muscles resulting in ptosis and ophthalmoparesis (or paresis of the extraocular muscles) without associated systemic involvement; however, caution is advised because many individuals with apparently isolated arPEO at the onset develop other manifestations of POLG-related disorders over years or decades. Of note, in the ANS spectrum the neuropathy commonly precedes the onset of PEO by years to decades.
  • Autosomal dominant progressive external ophthalmoplegia (adPEO) typically includes a generalized myopathy and often variable degrees of sensorineural hearing loss, axonal neuropathy, ataxia, depression, parkinsonism, hypogonadism, and cataracts (in what has been called "chronic progressive external ophthalmoplegia plus," or "CPEO+").

Diagnosis/testing.

Establishing the diagnosis of a POLG-related disorder relies on clinical findings and identification of biallelic POLG pathogenic variants for all phenotypes except adPEO, for which identification of a heterozygous POLG pathogenic variant is diagnostic.

Management.

Treatment of manifestations: Clinical management is largely supportive and involves conventional approaches for associated complications including occupational, physical, and speech therapy; nutritional interventions; and standard respiratory support, treatment for liver failure and disorders of arousal and sleep, and management of seizures and movement disorders.

Prevention of secondary complications: Dose reductions of medications metabolized by hepatic enzymes to avoid toxicity.

Surveillance: Evaluations by a multidisciplinary team of health care providers based on clinical findings; monitoring of liver enzymes every two to four weeks after introduction of any new anticonvulsant.

Agents/circumstances to avoid: Valproic acid (Depakene®) and sodium divalproate (divalproex) (Depakote®) because of the risk of precipitating and/or accelerating liver disease.

Genetic counseling.

The POLG-related disorders in the spectrum of AHS, MCHS, MEMSA, ANS, and arPEO are inherited in an autosomal recessive manner. Autosomal dominant PEO (adPEO) is inherited in an autosomal dominant manner. For autosomal recessive phenotypes: heterozygotes (carriers) are generally believed to be asymptomatic; the offspring of carrier parents have a 25% chance of being affected, a 50% chance of being carriers, and a 25% chance of being unaffected and not carriers; carrier testing for at-risk family members is possible if the pathogenic variants in the family are known. For the autosomal dominant phenotype: most affected individuals have an affected parent; each child of an affected individual has a 50% chance of inheriting the pathogenic variant. For pregnancies at increased risk for all phenotypes, prenatal diagnosis is possible if the pathogenic variant(s) in the family are known.

Diagnosis

Suggestive Findings

POLG-related disorders comprise a continuum of overlapping phenotypes. A POLG-related disorder should be suspected in individuals with combinations of the following clinical features and laboratory findings.

Clinical features

  • Hypotonia
  • Developmental delay
  • Seizures
  • Movement disorder (e.g., myoclonus, dysarthria, choreoathetosis, parkinsonism)
  • Myopathy (e.g., ptosis, ophthalmoplegia, proximal > distal limb weakness with fatigue and exercise intolerance)
  • Ataxia
  • Peripheral neuropathy
  • Episodic psychomotor regression
  • Psychiatric illness (e.g., depression, mood disorder)
  • Endocrinopathy (e.g., diabetes mellitus, premature ovarian failure)

Laboratory findings

  • Liver dysfunction or failure, which may follow exposure to certain antiepileptic drugs. This could result in elevations in the liver enzymes ALT, AST, and GTT as well as synthetic liver dysfunction causing hypoglycemia, hyperammonemia, elevated glutamine, hyperbilirubinemia, prolonged bleeding times (INR, PT, PTT), hypoalbuminemia, and low cholesterol.
  • Respiratory chain defect and/or a defect of mitochondrial (mt) DNA (depletion or multiple deletions). This could result in respiratory chain dysfunction, identified by either enzymatic assays or polarographic assays. Depletion of mtDNA can be measured by comparing the value of mtDNA content in an affected tissue (e.g., liver) with the nuclear DNA content. The use of Southern blot or long-range PCR of the mtDNA can detect deletions or multiple deletions in some individuals. Note: Biochemical findings on muscle biopsy can be normal, and normal respiratory chain function or absence of mtDNA depletion should not rule out consideration of a POLG-related disorder.
  • Cerebrospinal fluid (CSF) protein is generally elevated in individuals with Alpers-Huttenlocher syndrome (AHS).

Radiographic features

  • Brain computerized tomography (CT) or magnetic resonance imaging (MRI) may be normal early in the course of AHS.
  • As the illness evolves neuroimaging shows gliosis (initially more pronounced in the occipital lobe regions) and generalized brain atrophy.

Establishing the Diagnosis

Clinical diagnostic criteria do not exist. The diagnosis of most POLG-related disorders is established in a proband by identification of biallelic pathogenic variants in POLG by molecular genetic testing (see Table 1). The diagnosis of adPEO is established in a proband by identification of a heterozygous pathogenic variant in POLG by molecular genetic testing (see Table 1).

Molecular genetic testing approaches can include serial single-gene testing, use of a multigene panel, and more comprehensive genomic testing:

  • Serial single-gene testing. Sequence analysis of POLG is performed first and followed by gene-targeted deletion/duplication analysis if no pathogenic variant is found.
    Sequence analysis of TWNK (formerly C10orf2 or PEO1) may be considered in persons with a suspected autosomal recessive POLG-related disorder but in whom only one POLG pathogenic variant was identified by single-gene testing, to investigate the possibility of digenic inheritance (see Differential Diagnosis). Digenic inheritance has been reported in autosomal recessive progressive external ophthalmoplegia (arPEO) in a simplex case with pathogenic variants in POLG and TWNK [Van Goethem et al 2003a].
    Note: In the 5% of simplex cases of PEO in which only a single pathogenic variant is identified, it can be difficult to distinguish between autosomal recessive inheritance and autosomal dominant inheritance caused by a de novo POLG pathogenic variant.
  • A multigene panel that includes POLG, TWNK (formerly C10orf2 or PEO1), and other genes of interest (see Differential Diagnosis) may be considered. Note: (1) The genes included in the panel and the diagnostic sensitivity of the testing used for each gene vary by laboratory and are likely to change over time. (2) Some multigene panels may include genes not associated with the condition discussed in this GeneReview; thus, clinicians need to determine which multigene panel is most likely to identify the genetic cause of the condition at the most reasonable cost while limiting identification of variants of uncertain significance and pathogenic variants in genes that do not explain the underlying phenotype. (3) In some laboratories, panel options may include a custom laboratory-designed panel and/or custom phenotype-focused exome analysis that includes genes specified by the clinician. (4) Methods used in a panel may include sequence analysis, deletion/duplication analysis, and/or other non-sequencing-based tests.
    For an introduction to multigene panels click here. More detailed information for clinicians ordering genetic tests can be found here.
  • More comprehensive genomic testing (when available) including exome sequencing, mtDNA sequencing, and genome sequencing may be considered. Such testing may provide or suggest a diagnosis not previously considered (e.g., mutation of a different gene or genes that results in a similar clinical presentation).
    For an introduction to comprehensive genomic testing click here. More detailed information for clinicians ordering genomic testing can be found here.

Table 1.

Molecular Genetic Testing Used in POLG-Related Disorders

Gene 1MethodProportion of Pathogenic Variants 2 Detectable by Method
POLGSequence analysis 3>95% 4
Gene-targeted deletion/duplication analysis 5Three alleles reported 6
1.

See Table A. Genes and Databases for chromosome locus and protein.

2.

See Molecular Genetics for information on allelic variants detected in this gene.

3.

Sequence analysis detects variants that are benign, likely benign, of uncertain significance, likely pathogenic, or pathogenic. Pathogenic variants may include small intragenic deletions/insertions and missense, nonsense, and splice site variants; typically, exon or whole-gene deletions/duplications are not detected. For issues to consider in interpretation of sequence analysis results, click here.

4.

Ashley et al [2008], Hunter et al [2011]

5.

Gene-targeted deletion/duplication analysis detects intragenic deletions or duplications. Methods used may include quantitative PCR, long-range PCR, multiplex ligation-dependent probe amplification (MLPA), and a gene-targeted microarray designed to detect single-exon deletions or duplications.

6.

Compton et al [2011], Naess et al [2012], Rouzier et al [2014]

Clinical Characteristics

Clinical Description

POLG-related disorders comprise a continuum of broad and overlapping phenotypes that can be distinct clinical entities or consist of a spectrum of overlapping phenotypes. Presentations within a given family are usually similar. Although almost any organ system can be involved, evidence to date suggests that diabetes and cardiomyopathy are not common in POLG-related disorders, distinguishing them from other multisystem mitochondrial diseases.

Table 2 summarizes the clinical findings in POLG-related disorders. Because the description of new POLG pathogenic variants is ongoing, knowledge of their associated phenotypes continues to evolve.

Table 2.

Clinical Findings in POLG-Related Disorders

FindingManifestationNotes/References
CorticalHypotoniaNguyen et al [2006], Wong et al [2008]
Developmental delay
Seizure disorderMyoclonusCommon in children [Horvath et al 2006] & adults w/ataxia [Van Goethem et al 2004, Hakonen et al 2005, Tzoulis et al 2006]
Focal motor seizuresTzoulis et al [2006]
Generalized seizuresHakonen et al [2005], Winterthun et al [2005], Horvath et al [2006]
Status epilepticusTzoulis et al [2006]
"Cerebrovascular" involvementMigraineMay precede other features by many years [Hakonen et al 2005, Tzoulis et al 2006]
Stroke-like episodesUsually asymptomatic in children, diagnosed on imaging [Horvath et al 2006]
Extrapyramidal movement disorderParkinsonismResponds to levodopa [Luoma et al 2004, Mancuso et al 2004]
ChoreaHakonen et al [2005]
Peripheral neuropathySensory neuronopathy / ganglionopathyCorresponds to the acronym SANDO [Van Goethem et al 2003b]; profound sensory ataxia
Axonal sensorimotor neuropathyDavidzon et al [2006], Horvath et al [2006]
Cerebellar involvementAtaxiaVan Goethem et al [2004], Hakonen et al [2005], Winterthun et al [2005], Horvath et al [2006]
Psychiatric illnessDepressionLuoma et al [2004]
PsychosisHakonen et al [2005], Horvath et al [2006]
DementiaVan Goethem et al [2004], Horvath et al [2006]
Special sensorySensorineural deafnessDi Fonzo et al [2003], Filosto et al [2003], Hakonen et al [2005], Horvath et al [2006]
RetinopathyDi Fonzo et al [2003], Luoma et al [2004], Hakonen et al [2005]
OcularCataractBekheirnia et al [2012]
Gastrointestinal systemLiver failureSpontaneous or precipitated by sodium valproate in children [Naviaux & Nguyen 2004, Nguyen et al 2005, Horvath et al 2006]; also in adults w/ataxia [Van Goethem et al 2004, Tzoulis et al 2006]
Gastrointestinal dysmotilityFilosto et al [2003]
MyopathyPtosis & external ophthalmoplegiaMay be isolated ptosis [Luoma et al 2005]
Proximal myopathyDistal myopathy reported [Horvath et al 2006]
Exercise intoleranceDi Fonzo et al [2003], Luoma et al [2004], Hakonen et al [2005]
Endocrine/gonadal systemDiabetes mellitusHorvath et al [2006]
Primary ovarian failureLuoma et al [2004], Hakonen et al [2005]
Ovarian dysgenesisBekheirnia et al [2012]
Primary testicular failureFilosto et al [2003]
HeartCardiomyopathyVan Goethem et al [2004], Horvath et al [2006]

Reproduced and modified from Hudson & Chinnery [2006]

Although some affected individuals present with a classic syndrome, many have some, but not all, of the features of one or more of the recognized phenotypes. POLG-related disorders can therefore be considered as an overlapping spectrum of disease presenting from early childhood to late adulthood. The age of onset broadly correlates with the clinical phenotype.

Alpers-Huttenlocher Syndrome (AHS)

AHS, one of the most severe phenotypic manifestations in the spectrum of POLG-related disorders, is characterized by a progressive and ultimately severe encephalopathy with intractable epilepsy, neuropathy, and hepatic failure. While AHS is usually fatal, the age of onset, rate of neurologic degeneration, presence of hepatic failure, and age of death vary [Davidzon et al 2006, Nguyen et al 2006, Wong et al 2008, Cohen & Naviaux 2010, Saneto et al 2013].

Children with AHS appear healthy at birth and may develop normally over the first few weeks to years of life. Some have variable degrees of developmental delay prior to the initial recognition of neurodegeneration. Onset is usually between ages two and four years, but ranges from one month to 36 years.

Seizures are the first sign of AHS in about 50% of affected children. Seizures may be simple focal, primary generalized, or myoclonic. The most common early seizure types are partial seizures and secondary generalized tonic-clonic seizures. In some children the first seizure presents with status epilepticus. EEG findings include high-amplitude slow activity with smaller polyspikes or intermittent continuous spike-wave activity [Wörle et al 1998].

In some instances the first seizure type is epilepsia partialis continua (EPC), a classic seizure type in which the motor seizure involves only one portion of the body (e.g., a limb) with a constant and repetitive myoclonic jerking, continuing for hours or days with or without dramatic effects on consciousness. EPC is not always apparent as an abnormality on EEG and can be mistaken for a conversion reaction. EEG may be normal or show only focal slowing of the background rhythm.

Over time the seizures can evolve into a complex epileptic disorder such as focal status epilepticus, epilepsia partialis continua, or multifocal myoclonic epilepsy [Horvath et al 2006, Tzoulis et al 2006].

In some children the seizures are initially controllable with usual dosages of anticonvulsants; in others the seizures, such as EPC, are refractory from the onset. Over time the seizures become increasingly resistant to anticonvulsant therapy. See Treatment of Manifestations for further information about management of seizures. Of note, valproic acid (Depakene®) and sodium divalproate (divalproex) (Depakote®) can precipitate the liver dysfunction in AHS and should be avoided [Saneto et al 2010].

Headaches, another common first presenting symptom, are typically associated with visual sensations or visual auras that reflect early occipital lobe dysfunction [Hakonen et al 2005, Tzoulis et al 2006]. Stroke and stroke-like episodes may occur in this disorder as well [Horvath et al 2006].

Movement disorders, primarily myoclonus and choreoathetosis, are common [Horvath et al 2006]. Myoclonus can be difficult to distinguish from myoclonic seizures and EPC. Palatal myoclonus resulting from involvement of the inferior olivary nuclei can be seen as well. Some develop parkinsonism, which may temporarily respond to levodopa [Luoma et al 2004, Mancuso et al 2004].

Neuropathy and ataxia develop in all persons with AHS unless the disease process is so rapid that it results in early death. All neurologic signs and symptoms, including ataxia and nystagmus, may worsen during infections or with other physiologic stressors.

Areflexia (resulting from neuropathy) and hypotonia (possibly the result of generalized weakness as part of systemic illness or pyramidal or extrapyramidal dysfunction) are often both present early in the disease course.

Episodic psychomotor regression is variably present at the time of initial consideration of the diagnosis. The major motor manifestation is a progressive spastic paraparesis resulting from progressive loss of cortical neuronal function. Progressive spasticity occurs universally; has variable onset, and evolves over months to years.

Loss of cognitive function occurs throughout the course of the disease, but the time of onset and rate of progression are variable. Significant sudden or rapid regression is often seen during infectious illnesses. The clinical manifestations may include somnolence, loss of concentration, loss of language skills (both receptive and expressive), irritability with loss of normal emotional responses, and memory deficits. In addition to the dementia caused by loss of brain tissue and the refractory seizures, the high dosages of medication used to treat those seizures can lead to significant cognitive impairment. The degree of dementia is often difficult to assess because of the frequent seizures and high therapeutic doses of anticonvulsants, which can cloud the sensorium.

Cortical visual loss leading to blindness may appear months to years after the onset of other neurologic manifestations. Retinopathy (retinitis pigmentosa) may also play a less important role in vision loss [Hakonen et al 2005]. Hearing loss is variable [Hakonen et al 2005, Horvath et al 2006].

Liver involvement can progress rapidly to end-stage liver failure within a few months, although this is highly variable. End-stage liver disease is often heralded by hypoalbuminemia and prolonged coagulation time, followed shortly thereafter by fasting hypoglycemia and hyperammonemia. Rapid onset of liver failure is described when valproic acid (Depakene®) and sodium divalproate (divalproex) (Depakote®) have been used to treat seizures, although the introduction of other anticonvulsants, including phenytoin, may also play a role in onset of hepatic failure. Longer survival in AHS through improved care for those with profound dementia and motor dysfunction results in the occurrence of late-onset hepatic involvement in a higher percentage of children with AHS now than previously noted.

Disease progression is variable in timing and rapidity. Loss of neurologic function culminates in dementia, spastic quadriparesis from corticospinal tract involvement, visual loss, and death. The rate of neurodegeneration varies and is marked by periods of stability. The typical life expectancy from onset of first symptoms ranges from three months to 12 years.

Neuroimaging. CT or MRI of the brain may be normal early in the course of AHS. As the illness evolves neuroimaging shows gliosis (initially more pronounced in the occipital lobe regions) and generalized brain atrophy.

FLAIR and T2-weighted sequence images demonstrate high signal intensity in deep gray matter nuclei, especially in the thalamus and cerebellum [Smith et al 1996]. Lesions described in the inferior olivary nuclei may also be a part of AHS and are associated with palatal myoclonus.

Pathophysiology. Depletion of mtDNA develops in clinically affected tissues causing a mitochondrial oxidative-phosphorylation defect resulting in the clinical findings of AHS.

Brain. The gross appearance of the brain varies from normal to severe atrophy, depending on the state of disease progression. The central nervous system regions affected in AHS are the same as those affected by Leigh syndrome but typically evolve in the reverse order. For example, in AHS the gliosis is most severe and occurs earliest in the cerebral cortex, followed by the cerebellum, basal ganglia, and brain stem. Involved regions demonstrate neuronal degeneration, characteristic spongiform or microcystic degeneration, and – as seen in Leigh syndrome – gliosis, necrosis, and capillary proliferation. The cortical ribbon shows patchy lesions, but the calcarine cortex, which is characteristically involved early in the course of the disease, is usually narrowed, granular, and discolored.

Microscopic abnormalities, present throughout the cerebral cortex, evolve as the disease progresses. Early in the course of the disease spongiosis, astrocytosis, and neuronal loss are prevalent in the superficial cortex. Later the deeper laminae are affected. In the most advanced stage the entire cortex becomes a thin dense gliotic scar. Usually the striate cortex is the most affected part of the brain followed by the thalamus, hippocampus, and cerebellum. These pathologic features differ from those resulting from hypoxic injury, recurrent seizures, or other causes of hepatic failure.

Liver. Liver histology may demonstrate macro- and microvesicular steatosis, centrilobular necrosis, disorganization of the normal lobular architecture, hepatocyte loss with or without bridging fibrosis or cirrhosis, regenerative nodules, bile duct proliferation, or mitochondrial proliferation with a vivid eosinophilic cytoplasm (oncocytic change). Florid cirrhosis occurs late in the disease. This pathology differs from that seen in chemically induced or toxic hepatopathies.

Childhood Myocerebrohepatopathy Spectrum (MCHS)

MCHS presents between the first few months of life and about age three years with developmental delay or dementia, lactic acidosis, and a myopathy with failure to thrive. Other features of a mitochondrial disorder that may be present include liver failure, renal tubular acidosis, pancreatitis, cyclic vomiting, and hearing loss. Seizures are not present, at least early in the disease course [Wong et al 2008].

Myoclonic Epilepsy Myopathy Sensory Ataxia (MEMSA)

Previously referred to as spinocerebellar ataxia with epilepsy (SCAE), MEMSA now describes the spectrum of disorders with myopathy, epilepsy, and ataxia without ophthalmoplegia. Cerebellar ataxia, generally the first sign, begins in young adulthood as a subclinical sensory polyneuropathy. Epilepsy develops in later years, often beginning focally in the right arm and then spreading to become generalized. The seizures may be refractory to conventional therapy, including anesthesia. Recurrent bouts of seizure activity are accompanied by progressive interictal encephalopathy. The myopathy in MEMSA may be distal or proximal, and, as in the other POLG-related disorders, it also may present as exercise intolerance.

Ataxia Neuropathy Spectrum (ANS)

ANS includes mitochondrial recessive ataxia syndrome (MIRAS) and a separate entity known as sensory ataxia neuropathy dysarthria and ophthalmoplegia (SANDO) [Fadic et al 1997]. ANS is characterized by ataxia, neuropathy, and (in most but not all affected individuals) an encephalopathy with seizures. The encephalopathy is similar to that seen in AHS but tends to be more slowly progressive and can even be mild. The neuropathy may be sensory, motor, or mixed and can be severe enough to contribute to ataxia – so-called sensory ataxia. About 25% of affected individuals have cramps, but clinical myopathy is rare.

Other features may include myoclonus, blindness, and liver dysfunction [Wong et al 2008]. Liver findings range from no dysfunction to elevated enzymes and mild synthetic dysfunction, to (in some cases) florid liver failure [Tzoulis et al 2006, Wong et al 2008]. Psychiatric illness including depression is common. Headache, generally migrainous, is also common and may precede other symptoms by many years.

Although muscle pathology may show COX-negative fibers, there may be no pathologic findings.

Autosomal Recessive Progressive External Ophthalmoplegia (arPEO)

Progressive PEO without systemic involvement is the hallmark of arPEO. Caution needs to be exercised, however, when making the diagnosis of arPEO, as some POLG pathogenic variants associated with arPEO are also associated with ANS and other POLG-related disorders with systemic involvement. Thus, many individuals who have no other clinical findings at the time of diagnosis with isolated arPEO develop other manifestations of POLG-related disorders over subsequent years or decades [Van Goethem et al 2001, Lamantea et al 2002, Van Goethem et al 2003b]. In the past these findings were designated "PEO+" or "PEO+ disease."

Autosomal Dominant Progressive External Ophthalmoplegia (adPEO)

The universal manifestation of this adult-onset disorder is progressive weakness of the extraocular eye muscles resulting in ptosis and strabismus [Van Goethem et al 2001]. A generalized myopathy is present in most affected individuals, leading to early fatigue and exercise intolerance. Some affected individuals (in what has been called "chronic progressive external ophthalmoplegia plus," or CPEO+) have variable degrees of sensorineural hearing loss, axonal neuropathy, ataxia, depression, parkinsonism, hypogonadism, and cataracts [Luoma et al 2004, Pagnamenta et al 2006]. Cardiomyopathy and gastrointestinal dysmotility are less common.

Genotype-Phenotype Correlations

Genotype-phenotype correlations are not possible because all combinations of pathogenic variant type and location have been associated with the entire phenotypic spectrum and with both autosomal recessive and autosomal dominant inheritance.

Nomenclature

Alpers-Huttenlocher syndrome (AHS) is named after Bernard Alpers, who first described the disease in 1931, and Peter Huttenlocher, who with his colleagues described the associated liver disease and autosomal recessive mode of inheritance [Huttenlocher et al 1976].

In the older literature, autosomal dominant progressive external ophthalmoplegia (adPEO) associated with additional findings was labeled "chronic progressive external ophthalmoplegia plus" (CPEO+).

Prevalence

AHS is reported to affect approximately one in 51,000 people [Darin et al 2001]; however, because some pathogenic variants are found at high frequencies in certain populations and founder variants occur in some populations, the frequency may vary greatly by ethnicity.

The sum frequency of the most common autosomal recessive pathogenic variants can be used to estimate disease frequency at 1:10,000:

  • p.Ala467Thr. ~0.2%-0.6% (up to 1% in Norway)
  • p.[Trp748Ser;Glu1143Gly]. ~0.1%-0.8%
  • p.Gly848Ser. ~0.05%-0.1%
  • p.Pro587Leu. ~0.05%

Pathogenic variants in POLG, identified in nearly 50% of individuals with autosomal dominant PEO (adPEO) in one study [Lamantea et al 2002], may be the most frequent cause of adPEO.

Differential Diagnosis

Epilepsia partialis continua (EPC), seen in Alpers-Huttenlocher syndrome, can result from structural brain lesions (e.g., stroke, neoplasia, cortical dysplasia, traumatic lesion). EPC has also been described in individuals with COQ8A-related primary coenzyme Q10 deficiency [Hikmat et al 2016], NADH coenzyme Q reductase deficiency [Antozzi et al 1995], MERRF, Leigh syndrome [Mameniškienė & Wolf 2017], and nonketotic hyperglycemia [Mameniškienė & Wolf 2017]. Recently, biallelic TBC1D24 pathogenic variants were identified in an individual with EPC [Zhou et al 2018].

Mitochondrial DNA Depletion (MDD) Disorders

MDD disorders may affect either a specific tissue (most commonly muscle or liver) or multiple organs, including the heart, brain, and kidney. MDD disorders need to be distinguished from the disorders of mtDNA mutation, duplication, or deletion (see Mitochondrial Disorders Overview).

Mitocondrial DNA depletion syndromes, a genetically and clinically heterogeneous group of autosomal recessive disorders, are characterized by a severe reduction in mtDNA content leading to impaired energy production in affected tissues and organs.

Mitochondrial DNA depletion syndromes occur as a result of defects in mtDNA maintenance caused by pathogenic variants in nuclear genes that function in either mitochondrial nucleotide synthesis (e.g., TK2, SUCLA2, SUCLG1, RRM2B, DGUOK, and TYMP) or mtDNA replication (e.g., POLG and TWNK).

Mitochondrial DNA depletion syndromes are phenotypically classified into myopathic, encephalomyopathic, hepatocerebral, and neurogastrointestinal forms (see Table 3) [El-Hattab & Scaglia 2013].

  • Myopathic forms present in infancy or early childhood with hypotonia, proximal muscle weakness, and feeding difficulty. Cognition is usually spared. Typically, there is rapid progression of muscle weakness with respiratory failure and death within a few years of onset.
  • Encephalomyopathic mtDNA depletion syndromes present in infancy with hypotonia and global developmental delay. Depending on the underlying defect, other features including deafness, movement disorders, Leigh like syndrome, and renal disease can be observed.
  • Hepatocerebral forms present with early-onset liver dysfunction and neurologic involvement, including developmental delay, abnormal eye movements, and peripheral neuropathy.
  • Neurogastrointestinal forms, the prototype of which is mitochondrial neurogastrointestinal encephalopathy (MNGIE) disease, present in adolescence to early adulthood with progressive gastrointestinal dysmotility, cachexia, and peripheral neuropathy.

Table 3 classifies the mtDNA depletion syndromes by phenotypic category and associated genes.

Note: For some of the genes (POLG and TWNK), other phenotypes not associated with mtDNA depletion with autosomal dominant or recessive inheritance have been reported.

Table 3.

Mitochondrial DNA Depletion Syndromes

Phenotype 1GeneMitochondrial DNA Depletion Syndrome #, Type 2Function of Gene Product
HepatocerebralDGUOK3, hepatocerebral typedNTP pools
POLG4A, Alpers type
(POLG-related disorders)
mtDNA replication
MPV176, hepatocerebral type
(MPV17-related hepatocerebral mtDNA depletion syndrome)